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SMAD3 (SMAD family member 3)

Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
4088
Gene nameGene Name - the full gene name approved by the HGNC.
SMAD family member 3
Gene symbolGene Symbol - the official gene symbol approved by the HGNC, which is a short abbreviated form of the gene name.
SMAD3
SynonymsGene synonyms aliases
HSPC193, HsT17436, JV15-2, LDS1C, LDS3, MADH3
ChromosomeChromosome number
15
Chromosome locationChromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
15q22.33
SummarySummary of gene provided in NCBI Entrez Gene.
The SMAD family of proteins are a group of intracellular signal transducer proteins similar to the gene products of the Drosophila gene `mothers against decapentaplegic` (Mad) and the C. elegans gene Sma. The SMAD3 protein functions in the transforming growth factor-beta signaling pathway, and transmits signals from the cell surface to the nucleus, regulating gene activity and cell proliferation. It also functions as a tumor suppressor. Mutations in this gene are associated with aneurysms-osteoarthritis syndrome and Loeys-Dietz Syndrome 3. [provided by RefSeq, Nov 2019]
SNPsSNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs139616052 G>A Likely-benign, conflicting-interpretations-of-pathogenicity, uncertain-significance Coding sequence variant, synonymous variant
rs201263330 G>C,T Likely-pathogenic Coding sequence variant, missense variant
rs201912204 G>A Likely-benign, conflicting-interpretations-of-pathogenicity, uncertain-significance, benign Upstream transcript variant, intron variant, genic upstream transcript variant
rs202094530 G>A Likely-benign, conflicting-interpretations-of-pathogenicity, uncertain-significance Coding sequence variant, missense variant
rs387906850 C>T Likely-pathogenic, pathogenic Coding sequence variant, missense variant
miRNAmiRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT007291 hsa-miR-200a-3p Luciferase reporter assay 22020340
MIRT007323 hsa-miR-18a-5p Western blot 23249750
MIRT018567 hsa-miR-335-5p Microarray 18185580
MIRT020918 hsa-miR-155-5p Western blot 21036908
MIRT041360 hsa-miR-193b-3p CLASH 23622248
Transcription factors
Transcription factor Regulation Reference
ARID1A Unknown 21900401
TP53 Unknown 21900401
TRIB3 Unknown 21896644
WT1 Activation 20842112
WWTR1 Activation 22470139
Gene ontology (GO)Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0000122 Process Negative regulation of transcription by RNA polymerase II IDA 8774881
GO:0000122 Process Negative regulation of transcription by RNA polymerase II IMP 14555988
GO:0000122 Process Negative regulation of transcription by RNA polymerase II TAS
GO:0000785 Component Chromatin IDA 21828274
GO:0000785 Component Chromatin ISA
Other IDsOther ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM
HGNC
e!Ensembl
Protein
UniProt ID P84022
Protein name Mothers against decapentaplegic homolog 3 (MAD homolog 3) (Mad3) (Mothers against DPP homolog 3) (hMAD-3) (JV15-2) (SMAD family member 3) (SMAD 3) (Smad3) (hSMAD3)
Protein function Receptor-regulated SMAD (R-SMAD) that is an intracellular signal transducer and transcriptional modulator activated by TGF-beta (transforming growth factor) and activin type 1 receptor kinases. Binds the TRE element in the promoter region of many genes that are regulated by TGF-beta and, on formation of the SMAD3/SMAD4 complex, activates transcription. Also can form a SMAD3/SMAD4/JUN/FOS complex at the AP-1/SMAD site to regulate TGF-beta-mediated transcription. Has an inhibitory effect on wound healing probably by modulating both growth and migration of primary keratinocytes and by altering the TGF-mediated chemotaxis of monocytes. This effect on wound healing appears to be hormone-sensitive. Regulator of chondrogenesis and osteogenesis and inhibits early healing of bone fractures. Positively regulates PDPK1 kinase activity by stimulating its dissociation from the 14-3-3 protein YWHAQ which acts as a negative regulator.
PDB 1MHD , 1MJS , 1MK2 , 1OZJ , 1U7F , 2LAJ , 2LB2 , 5OD6 , 5ODG , 5XOC , 6ZMN
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF03165 MH1
31 131
MH1 domain
Domain
PF03166 MH2
230 401
MH2 domain
Family
Sequence
Sequence length 425
Interactions View interactions

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