PSMC1 (proteasome 26S subunit, ATPase 1)

Gene

• Entrez ID: 5700
• Gene name: Proteasome 26S subunit, ATPase 1
• Gene symbol: PSMC1
• Synonyms: NEDGTH, P26S4, RPT2, S4, p56
• Chromosome: 14
• Chromosome location: 14q32.11
• Summary: The 26S proteasome is a multicatalytic proteinase complex with a highly ordered structure composed of 2 complexes, a 20S core and a 19S regulator. The 20S core is composed of 4 rings of 28 non-identical subunits; 2 rings are composed of 7 alpha subunits a

miRNA

miRTarBase ID	miRNA	Experiments	Reference
MIRT028792	hsa-miR-26b-5p	Microarray	19088304
MIRT051203	hsa-miR-16-5p	CLASH	23622248
MIRT038229	hsa-miR-342-5p	CLASH	23622248
MIRT649822	hsa-miR-1250-3p	HITS-CLIP	23824327
MIRT649821	hsa-miR-150-5p	HITS-CLIP	23824327
MIRT649820	hsa-miR-532-3p	HITS-CLIP	23824327
MIRT649819	hsa-miR-2116-3p	HITS-CLIP	23824327
MIRT649818	hsa-miR-539-5p	HITS-CLIP	23824327
MIRT649817	hsa-miR-378a-5p	HITS-CLIP	23824327
MIRT649816	hsa-miR-1200	HITS-CLIP	23824327
MIRT649815	hsa-miR-4713-5p	HITS-CLIP	23824327
MIRT649814	hsa-miR-580-3p	HITS-CLIP	23824327
MIRT649813	hsa-miR-3074-5p	HITS-CLIP	23824327
MIRT649812	hsa-miR-7152-5p	HITS-CLIP	23824327
MIRT649822	hsa-miR-1250-3p	HITS-CLIP	23824327
MIRT649821	hsa-miR-150-5p	HITS-CLIP	23824327
MIRT649820	hsa-miR-532-3p	HITS-CLIP	23824327
MIRT649819	hsa-miR-2116-3p	HITS-CLIP	23824327
MIRT649818	hsa-miR-539-5p	HITS-CLIP	23824327
MIRT649817	hsa-miR-378a-5p	HITS-CLIP	23824327
MIRT649816	hsa-miR-1200	HITS-CLIP	23824327
MIRT649815	hsa-miR-4713-5p	HITS-CLIP	23824327
MIRT649814	hsa-miR-580-3p	HITS-CLIP	23824327
MIRT649813	hsa-miR-3074-5p	HITS-CLIP	23824327
MIRT649812	hsa-miR-7152-5p	HITS-CLIP	23824327
MIRT649822	hsa-miR-1250-3p	HITS-CLIP	23824327
MIRT649821	hsa-miR-150-5p	HITS-CLIP	23824327
MIRT649820	hsa-miR-532-3p	HITS-CLIP	23824327
MIRT649819	hsa-miR-2116-3p	HITS-CLIP	23824327
MIRT649818	hsa-miR-539-5p	HITS-CLIP	23824327
MIRT649817	hsa-miR-378a-5p	HITS-CLIP	23824327
MIRT649816	hsa-miR-1200	HITS-CLIP	23824327
MIRT649815	hsa-miR-4713-5p	HITS-CLIP	23824327
MIRT649814	hsa-miR-580-3p	HITS-CLIP	23824327
MIRT649813	hsa-miR-3074-5p	HITS-CLIP	23824327
MIRT649812	hsa-miR-7152-5p	HITS-CLIP	23824327
MIRT649822	hsa-miR-1250-3p	HITS-CLIP	23824327
MIRT649821	hsa-miR-150-5p	HITS-CLIP	23824327
MIRT649820	hsa-miR-532-3p	HITS-CLIP	23824327
MIRT649819	hsa-miR-2116-3p	HITS-CLIP	23824327
MIRT649818	hsa-miR-539-5p	HITS-CLIP	23824327
MIRT649817	hsa-miR-378a-5p	HITS-CLIP	23824327
MIRT649816	hsa-miR-1200	HITS-CLIP	23824327
MIRT649815	hsa-miR-4713-5p	HITS-CLIP	23824327
MIRT649814	hsa-miR-580-3p	HITS-CLIP	23824327
MIRT649813	hsa-miR-3074-5p	HITS-CLIP	23824327
MIRT649812	hsa-miR-7152-5p	HITS-CLIP	23824327
MIRT1270291	hsa-miR-1265	CLIP-seq
MIRT1270292	hsa-miR-1285	CLIP-seq
MIRT1270293	hsa-miR-1292	CLIP-seq
MIRT1270294	hsa-miR-2052	CLIP-seq
MIRT1270295	hsa-miR-2277-3p	CLIP-seq
MIRT1270296	hsa-miR-3145-5p	CLIP-seq
MIRT1270297	hsa-miR-3187-5p	CLIP-seq
MIRT1270298	hsa-miR-326	CLIP-seq
MIRT1270299	hsa-miR-330-5p	CLIP-seq
MIRT1270300	hsa-miR-378g	CLIP-seq
MIRT1270301	hsa-miR-3941	CLIP-seq
MIRT1270302	hsa-miR-4307	CLIP-seq
MIRT1270303	hsa-miR-4471	CLIP-seq
MIRT1270304	hsa-miR-4486	CLIP-seq
MIRT1270305	hsa-miR-4502	CLIP-seq
MIRT1270306	hsa-miR-4639-5p	CLIP-seq
MIRT1270307	hsa-miR-4643	CLIP-seq
MIRT1270308	hsa-miR-466	CLIP-seq
MIRT1270309	hsa-miR-4672	CLIP-seq
MIRT1270310	hsa-miR-4789-3p	CLIP-seq
MIRT1270311	hsa-miR-487b	CLIP-seq
MIRT1270312	hsa-miR-508-5p	CLIP-seq
MIRT1270313	hsa-miR-548c-3p	CLIP-seq
MIRT1270314	hsa-miR-612	CLIP-seq
MIRT1270292	hsa-miR-1285	CLIP-seq
MIRT1270294	hsa-miR-2052	CLIP-seq
MIRT1270296	hsa-miR-3145-5p	CLIP-seq
MIRT1270297	hsa-miR-3187-5p	CLIP-seq
MIRT1270298	hsa-miR-326	CLIP-seq
MIRT1270299	hsa-miR-330-5p	CLIP-seq
MIRT2079451	hsa-miR-361-3p	CLIP-seq
MIRT1270300	hsa-miR-378g	CLIP-seq
MIRT1270301	hsa-miR-3941	CLIP-seq
MIRT1270302	hsa-miR-4307	CLIP-seq
MIRT1270304	hsa-miR-4486	CLIP-seq
MIRT2079452	hsa-miR-4494	CLIP-seq
MIRT1270307	hsa-miR-4643	CLIP-seq
MIRT1270308	hsa-miR-466	CLIP-seq
MIRT1270309	hsa-miR-4672	CLIP-seq
MIRT2079453	hsa-miR-4771	CLIP-seq
MIRT1270310	hsa-miR-4789-3p	CLIP-seq
MIRT1270311	hsa-miR-487b	CLIP-seq
MIRT1270312	hsa-miR-508-5p	CLIP-seq
MIRT1270314	hsa-miR-612	CLIP-seq
MIRT1270291	hsa-miR-1265	CLIP-seq
MIRT1270292	hsa-miR-1285	CLIP-seq
MIRT1270293	hsa-miR-1292	CLIP-seq
MIRT2305757	hsa-miR-1972	CLIP-seq
MIRT1270294	hsa-miR-2052	CLIP-seq
MIRT1270296	hsa-miR-3145-5p	CLIP-seq
MIRT1270297	hsa-miR-3187-5p	CLIP-seq
MIRT1270298	hsa-miR-326	CLIP-seq
MIRT1270299	hsa-miR-330-5p	CLIP-seq
MIRT2079451	hsa-miR-361-3p	CLIP-seq
MIRT1270300	hsa-miR-378g	CLIP-seq
MIRT1270301	hsa-miR-3941	CLIP-seq
MIRT1270302	hsa-miR-4307	CLIP-seq
MIRT1270303	hsa-miR-4471	CLIP-seq
MIRT1270304	hsa-miR-4486	CLIP-seq
MIRT1270306	hsa-miR-4639-5p	CLIP-seq
MIRT1270307	hsa-miR-4643	CLIP-seq
MIRT1270308	hsa-miR-466	CLIP-seq
MIRT1270309	hsa-miR-4672	CLIP-seq
MIRT2305758	hsa-miR-4717-5p	CLIP-seq
MIRT1270310	hsa-miR-4789-3p	CLIP-seq
MIRT1270311	hsa-miR-487b	CLIP-seq
MIRT1270312	hsa-miR-508-5p	CLIP-seq
MIRT1270313	hsa-miR-548c-3p	CLIP-seq
MIRT1270314	hsa-miR-612	CLIP-seq
MIRT1270291	hsa-miR-1265	CLIP-seq
MIRT1270292	hsa-miR-1285	CLIP-seq
MIRT1270293	hsa-miR-1292	CLIP-seq
MIRT2602956	hsa-miR-150	CLIP-seq
MIRT2602957	hsa-miR-188-5p	CLIP-seq
MIRT2305757	hsa-miR-1972	CLIP-seq
MIRT2602958	hsa-miR-204	CLIP-seq
MIRT1270294	hsa-miR-2052	CLIP-seq
MIRT2602959	hsa-miR-211	CLIP-seq
MIRT1270295	hsa-miR-2277-3p	CLIP-seq
MIRT2602960	hsa-miR-3127-5p	CLIP-seq
MIRT1270296	hsa-miR-3145-5p	CLIP-seq
MIRT1270297	hsa-miR-3187-5p	CLIP-seq
MIRT1270298	hsa-miR-326	CLIP-seq
MIRT1270299	hsa-miR-330-5p	CLIP-seq
MIRT2079451	hsa-miR-361-3p	CLIP-seq
MIRT1270300	hsa-miR-378g	CLIP-seq
MIRT1270301	hsa-miR-3941	CLIP-seq
MIRT2602961	hsa-miR-4270	CLIP-seq
MIRT1270302	hsa-miR-4307	CLIP-seq
MIRT2602962	hsa-miR-4441	CLIP-seq
MIRT2602963	hsa-miR-4461	CLIP-seq
MIRT1270303	hsa-miR-4471	CLIP-seq
MIRT1270304	hsa-miR-4486	CLIP-seq
MIRT1270305	hsa-miR-4502	CLIP-seq
MIRT1270306	hsa-miR-4639-5p	CLIP-seq
MIRT1270307	hsa-miR-4643	CLIP-seq
MIRT1270308	hsa-miR-466	CLIP-seq
MIRT1270309	hsa-miR-4672	CLIP-seq
MIRT2305758	hsa-miR-4717-5p	CLIP-seq
MIRT1270310	hsa-miR-4789-3p	CLIP-seq
MIRT1270311	hsa-miR-487b	CLIP-seq
MIRT1270312	hsa-miR-508-5p	CLIP-seq
MIRT2602964	hsa-miR-539	CLIP-seq
MIRT1270313	hsa-miR-548c-3p	CLIP-seq
MIRT2602965	hsa-miR-580	CLIP-seq
MIRT1270314	hsa-miR-612	CLIP-seq
MIRT1270291	hsa-miR-1265	CLIP-seq
MIRT1270292	hsa-miR-1285	CLIP-seq
MIRT1270293	hsa-miR-1292	CLIP-seq
MIRT2602956	hsa-miR-150	CLIP-seq
MIRT2602957	hsa-miR-188-5p	CLIP-seq
MIRT2602958	hsa-miR-204	CLIP-seq
MIRT1270294	hsa-miR-2052	CLIP-seq
MIRT2602959	hsa-miR-211	CLIP-seq
MIRT1270295	hsa-miR-2277-3p	CLIP-seq
MIRT2602960	hsa-miR-3127-5p	CLIP-seq
MIRT1270296	hsa-miR-3145-5p	CLIP-seq
MIRT1270297	hsa-miR-3187-5p	CLIP-seq
MIRT1270298	hsa-miR-326	CLIP-seq
MIRT1270299	hsa-miR-330-5p	CLIP-seq
MIRT2079451	hsa-miR-361-3p	CLIP-seq
MIRT1270300	hsa-miR-378g	CLIP-seq
MIRT1270301	hsa-miR-3941	CLIP-seq
MIRT2602961	hsa-miR-4270	CLIP-seq
MIRT1270302	hsa-miR-4307	CLIP-seq
MIRT2602962	hsa-miR-4441	CLIP-seq
MIRT2602963	hsa-miR-4461	CLIP-seq
MIRT1270303	hsa-miR-4471	CLIP-seq
MIRT1270304	hsa-miR-4486	CLIP-seq
MIRT1270305	hsa-miR-4502	CLIP-seq
MIRT1270306	hsa-miR-4639-5p	CLIP-seq
MIRT1270307	hsa-miR-4643	CLIP-seq
MIRT1270308	hsa-miR-466	CLIP-seq
MIRT1270309	hsa-miR-4672	CLIP-seq
MIRT1270310	hsa-miR-4789-3p	CLIP-seq
MIRT1270311	hsa-miR-487b	CLIP-seq
MIRT1270312	hsa-miR-508-5p	CLIP-seq
MIRT2602964	hsa-miR-539	CLIP-seq
MIRT1270313	hsa-miR-548c-3p	CLIP-seq
MIRT2602965	hsa-miR-580	CLIP-seq
MIRT1270314	hsa-miR-612	CLIP-seq

Gene ontology (GO)

GO ID	Ontology	Definition	Evidence	Reference
GO:0000165	Process	MAPK cascade	TAS
GO:0000209	Process	Protein polyubiquitination	TAS
GO:0000502	Component	Proteasome complex	IDA	17323924
GO:0002223	Process	Stimulatory C-type lectin receptor signaling pathway	TAS
GO:0002479	Process	Antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent	TAS
GO:0003723	Function	RNA binding	HDA	22658674
GO:0005515	Function	Protein binding	IPI	9452483, 16189514, 16990800, 19060904, 19490896, 22901813, 23455924, 25416956, 26496610, 28514442, 29128334, 29636472, 31515488, 32296183, 32814053
GO:0005524	Function	ATP binding	IEA
GO:0005634	Component	Nucleus	HDA	21630459
GO:0005654	Component	Nucleoplasm	IDA
GO:0005654	Component	Nucleoplasm	TAS
GO:0005829	Component	Cytosol	IDA
GO:0005829	Component	Cytosol	TAS
GO:0006457	Process	Protein folding	TAS
GO:0006521	Process	Regulation of cellular amino acid metabolic process	TAS
GO:0008540	Component	Proteasome regulatory particle, base subcomplex	IBA	21873635
GO:0010972	Process	Negative regulation of G2/M transition of mitotic cell cycle	TAS
GO:0016020	Component	Membrane	HDA	19946888
GO:0016579	Process	Protein deubiquitination	TAS
GO:0016887	Function	ATPase activity	ISS	1429620
GO:0017025	Function	TBP-class protein binding	IBA	21873635
GO:0022624	Component	Proteasome accessory complex	ISS
GO:0031145	Process	Anaphase-promoting complex-dependent catabolic process	TAS
GO:0031146	Process	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process	TAS
GO:0033209	Process	Tumor necrosis factor-mediated signaling pathway	TAS
GO:0036402	Function	Proteasome-activating ATPase activity	IBA	21873635
GO:0038061	Process	NIK/NF-kappaB signaling	TAS
GO:0038095	Process	Fc-epsilon receptor signaling pathway	TAS
GO:0043161	Process	Proteasome-mediated ubiquitin-dependent protein catabolic process	TAS
GO:0043488	Process	Regulation of mRNA stability	TAS
GO:0043687	Process	Post-translational protein modification	TAS
GO:0050852	Process	T cell receptor signaling pathway	TAS
GO:0055085	Process	Transmembrane transport	TAS
GO:0060071	Process	Wnt signaling pathway, planar cell polarity pathway	TAS
GO:0061418	Process	Regulation of transcription from RNA polymerase II promoter in response to hypoxia	TAS
GO:0070498	Process	Interleukin-1-mediated signaling pathway	TAS
GO:0090090	Process	Negative regulation of canonical Wnt signaling pathway	TAS
GO:0090263	Process	Positive regulation of canonical Wnt signaling pathway	TAS
GO:1901215	Process	Negative regulation of neuron death	IEA
GO:1901800	Process	Positive regulation of proteasomal protein catabolic process	IEA
GO:1901990	Process	Regulation of mitotic cell cycle phase transition	TAS
GO:1902036	Process	Regulation of hematopoietic stem cell differentiation	TAS

Other IDs

• MIM: 602706
• HGNC: 9547
• e!Ensembl: ENSG00000100764

Protein

• UniProt ID: P62191
• Protein name: 26S proteasome regulatory subunit 4 (P26s4) (26S proteasome AAA-ATPase subunit RPT2) (Proteasome 26S subunit ATPase 1)
• Protein function: Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which
• PDB: 5GJQ, 5GJR, 5L4G, 5LN3, 5M32, 5T0C, 5T0G, 5T0H, 5T0I, 5T0J, 5VFP, 5VFQ, 5VFR, 5VFS, 5VFT, 5VFU, 5VGZ, 5VHF, 5VHH, 5VHI, 5VHJ, 5VHM, 5VHN, 5VHO, 5VHP, 5VHQ, 5VHR, 5VHS, 6MSB, 6MSD, 6MSG, 6MSH, 6MSJ, 6MSK, 6WJD, 6WJN, 7QXN, 7QXP, 7QXU, 7QXW, 7QXX, 7QY7, 7QYA, 7QYB, 7W37, 7W38, 7W39, 7W3A, 7W3B, 7W3C, 7W3F
• Family and domains:

  Pfam

  Accession	ID	Position in sequence	Description	Type
  PF16450	Prot_ATP_ID_OB	109 → 163	Proteasomal ATPase OB C-terminal domain	Domain
  PF00004	AAA	222 → 355	ATPase family associated with various cellular activities (AAA)	Domain
  PF17862	AAA_lid_3	377 → 421	AAA+ lid domain	Domain

• Sequence:

  MGQSQSGGHGPGGGKKDDKDKKKKYEPPVPTRVGKKKKKTKGPDAASKLPLVTPHTQCRL
  KLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNH
  AIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAP
  QETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVA
  NQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSG
  GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT
  KKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK
  KSKENVLYKKQEGTPEGLYL

• Sequence length: 440