GeDiPNet: Comprehensive Gene Data - OMIM, HGNC, Ensembl, UniProt, GO, Transcription Factors & miRNA

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AGRN (agrin)

Gene

Agrin

AGRN

AGRIN, CMS8, CMSPPD

1

1p36.33

This gene encodes one of several proteins that are critical in the development of the neuromuscular junction (NMJ), as identified in mouse knock-out studies. The encoded protein contains several laminin G, Kazal type serine protease inhibitor, and epiderm

Show/Hide all(27)

SNP ID	Visualize variation	Clinical significance	Consequence
rs113020870	C>T	Likely-benign, conflicting-interpretations-of-pathogenicity	Non coding transcript variant, synonymous variant, coding sequence variant
rs116836855	C>T	Conflicting-interpretations-of-pathogenicity, uncertain-significance	Non coding transcript variant, missense variant, coding sequence variant
rs141603403	C>G,T	Conflicting-interpretations-of-pathogenicity	Coding sequence variant, synonymous variant, non coding transcript variant
rs143324306	G>A	Conflicting-interpretations-of-pathogenicity, benign-likely-benign	Coding sequence variant, non coding transcript variant, missense variant
rs145444272	G>A	Conflicting-interpretations-of-pathogenicity, benign-likely-benign	Coding sequence variant, non coding transcript variant, missense variant
rs146243145	G>A	Conflicting-interpretations-of-pathogenicity	Missense variant, coding sequence variant, non coding transcript variant
rs199476396	G>C	Pathogenic	Missense variant, coding sequence variant, non coding transcript variant
rs201073369	G>A,C	Benign, conflicting-interpretations-of-pathogenicity, likely-benign	Genic upstream transcript variant, missense variant, coding sequence variant, non coding transcript variant
rs536657086	C>T	Likely-benign, conflicting-interpretations-of-pathogenicity	Synonymous variant, non coding transcript variant, coding sequence variant
rs544749044	C>T	Conflicting-interpretations-of-pathogenicity	Coding sequence variant, synonymous variant, non coding transcript variant
rs587777298	G>T	Pathogenic	Coding sequence variant, missense variant, non coding transcript variant
rs587777299	C>T	Pathogenic	Stop gained, coding sequence variant, non coding transcript variant
rs750176911	C>G,T	Likely-pathogenic	Coding sequence variant, non coding transcript variant, stop gained, missense variant
rs756623659	G>A	Pathogenic	Genic upstream transcript variant, missense variant, coding sequence variant, non coding transcript variant
rs763818876	G>A	Pathogenic	Non coding transcript variant, coding sequence variant, missense variant
rs764160563	G>A	Pathogenic	Non coding transcript variant, coding sequence variant, missense variant
rs779170859	T>C	Conflicting-interpretations-of-pathogenicity	Coding sequence variant, missense variant, non coding transcript variant
rs879253787	A>G,T	Pathogenic	Missense variant, coding sequence variant, non coding transcript variant, genic upstream transcript variant
rs879253788	->C	Pathogenic	Coding sequence variant, frameshift variant, non coding transcript variant
rs1239736447	C>G,T	Pathogenic	Synonymous variant, non coding transcript variant, coding sequence variant, stop gained
rs1553178276	->T	Likely-pathogenic	Non coding transcript variant, frameshift variant, coding sequence variant
rs1557700705	GCCAGGAGAATGTCTTCAAGAAGTTCGACGGCCC>-	Pathogenic	Coding sequence variant, frameshift variant, non coding transcript variant
rs1557721600	T>C	Likely-pathogenic	Coding sequence variant, missense variant, non coding transcript variant
rs1570190059	->CGGGC	Likely-pathogenic	Frameshift variant, non coding transcript variant, coding sequence variant
rs1570193864	GCGCCTGCGCC>-	Pathogenic	Frameshift variant, non coding transcript variant, coding sequence variant
rs1570195582	->CCCG	Pathogenic	Frameshift variant, non coding transcript variant, coding sequence variant
rs1570242061	CGACGCCTCCTGGGACCTCGGTCCCGGTCCCGTCTTCCTCCATCCAGGACCAACCT>-	Likely-pathogenic	Intron variant, non coding transcript variant, splice acceptor variant, coding sequence variant

Show/Hide all(343)

miRTarBase ID	miRNA	Experiments	Reference
MIRT001391	hsa-miR-1-3p	pSILAC	18668040
MIRT020958	hsa-miR-155-5p	Proteomics	17881434
MIRT001391	hsa-miR-1-3p	Proteomics;Other	18668040
MIRT031889	hsa-miR-16-5p	Proteomics	18668040
MIRT499104	hsa-miR-4323	PAR-CLIP	24398324
MIRT499103	hsa-miR-500b-3p	PAR-CLIP	24398324
MIRT499101	hsa-miR-4758-3p	PAR-CLIP	24398324
MIRT499102	hsa-miR-4632-3p	PAR-CLIP	24398324
MIRT499104	hsa-miR-4323	PAR-CLIP	24398324
MIRT499103	hsa-miR-500b-3p	PAR-CLIP	24398324
MIRT499101	hsa-miR-4758-3p	PAR-CLIP	24398324
MIRT499102	hsa-miR-4632-3p	PAR-CLIP	24398324
MIRT773003	hsa-miR-105	CLIP-seq
MIRT773004	hsa-miR-1197	CLIP-seq
MIRT773005	hsa-miR-1207-5p	CLIP-seq
MIRT773006	hsa-miR-1266	CLIP-seq
MIRT773007	hsa-miR-1273f	CLIP-seq
MIRT773008	hsa-miR-128	CLIP-seq
MIRT773009	hsa-miR-1280	CLIP-seq
MIRT773010	hsa-miR-1285	CLIP-seq
MIRT773011	hsa-miR-144	CLIP-seq
MIRT773012	hsa-miR-1827	CLIP-seq
MIRT773013	hsa-miR-188-3p	CLIP-seq
MIRT773014	hsa-miR-1912	CLIP-seq
MIRT773015	hsa-miR-214	CLIP-seq
MIRT773016	hsa-miR-224	CLIP-seq
MIRT773017	hsa-miR-2277-5p	CLIP-seq
MIRT773018	hsa-miR-27a	CLIP-seq
MIRT773019	hsa-miR-27b	CLIP-seq
MIRT773020	hsa-miR-28-3p	CLIP-seq
MIRT773021	hsa-miR-296-5p	CLIP-seq
MIRT773022	hsa-miR-31	CLIP-seq
MIRT773023	hsa-miR-3121-3p	CLIP-seq
MIRT773024	hsa-miR-3143	CLIP-seq
MIRT773025	hsa-miR-3150a-3p	CLIP-seq
MIRT773026	hsa-miR-3153	CLIP-seq
MIRT773027	hsa-miR-3163	CLIP-seq
MIRT773028	hsa-miR-3175	CLIP-seq
MIRT773029	hsa-miR-3176	CLIP-seq
MIRT773030	hsa-miR-3178	CLIP-seq
MIRT773031	hsa-miR-3183	CLIP-seq
MIRT773032	hsa-miR-3185	CLIP-seq
MIRT773033	hsa-miR-3187-5p	CLIP-seq
MIRT773034	hsa-miR-3189-5p	CLIP-seq
MIRT773035	hsa-miR-3202	CLIP-seq
MIRT773036	hsa-miR-331-3p	CLIP-seq
MIRT773037	hsa-miR-3613-3p	CLIP-seq
MIRT773038	hsa-miR-3619-5p	CLIP-seq
MIRT773039	hsa-miR-3652	CLIP-seq
MIRT773040	hsa-miR-3664-3p	CLIP-seq
MIRT773041	hsa-miR-3670	CLIP-seq
MIRT773042	hsa-miR-3671	CLIP-seq
MIRT773043	hsa-miR-3918	CLIP-seq
MIRT773044	hsa-miR-3922-3p	CLIP-seq
MIRT773045	hsa-miR-3937	CLIP-seq
MIRT773046	hsa-miR-3978	CLIP-seq
MIRT773047	hsa-miR-4251	CLIP-seq
MIRT773048	hsa-miR-4268	CLIP-seq
MIRT773049	hsa-miR-4269	CLIP-seq
MIRT773050	hsa-miR-4283	CLIP-seq
MIRT773051	hsa-miR-4291	CLIP-seq
MIRT773052	hsa-miR-4299	CLIP-seq
MIRT773053	hsa-miR-4303	CLIP-seq
MIRT773054	hsa-miR-4316	CLIP-seq
MIRT773055	hsa-miR-4329	CLIP-seq
MIRT773056	hsa-miR-4430	CLIP-seq
MIRT773057	hsa-miR-4435	CLIP-seq
MIRT773058	hsa-miR-4436a	CLIP-seq
MIRT773059	hsa-miR-4448	CLIP-seq
MIRT773060	hsa-miR-4456	CLIP-seq
MIRT773061	hsa-miR-4459	CLIP-seq
MIRT773062	hsa-miR-4476	CLIP-seq
MIRT773063	hsa-miR-4488	CLIP-seq
MIRT773064	hsa-miR-4489	CLIP-seq
MIRT773065	hsa-miR-4492	CLIP-seq
MIRT773066	hsa-miR-4498	CLIP-seq
MIRT773067	hsa-miR-4505	CLIP-seq
MIRT773068	hsa-miR-4508	CLIP-seq
MIRT773069	hsa-miR-4514	CLIP-seq
MIRT773070	hsa-miR-4518	CLIP-seq
MIRT773071	hsa-miR-4530	CLIP-seq
MIRT773072	hsa-miR-4533	CLIP-seq
MIRT773073	hsa-miR-4632	CLIP-seq
MIRT773074	hsa-miR-4640-5p	CLIP-seq
MIRT773075	hsa-miR-4643	CLIP-seq
MIRT773076	hsa-miR-4660	CLIP-seq
MIRT773077	hsa-miR-4668-3p	CLIP-seq
MIRT773078	hsa-miR-4668-5p	CLIP-seq
MIRT773079	hsa-miR-4685-5p	CLIP-seq
MIRT773080	hsa-miR-4687-5p	CLIP-seq
MIRT773081	hsa-miR-4692	CLIP-seq
MIRT773082	hsa-miR-4695-5p	CLIP-seq
MIRT773083	hsa-miR-4697-5p	CLIP-seq
MIRT773084	hsa-miR-4722-5p	CLIP-seq
MIRT773085	hsa-miR-4723-3p	CLIP-seq
MIRT773086	hsa-miR-4726-5p	CLIP-seq
MIRT773087	hsa-miR-4742-5p	CLIP-seq
MIRT773088	hsa-miR-4755-3p	CLIP-seq
MIRT773089	hsa-miR-4757-5p	CLIP-seq
MIRT773090	hsa-miR-4763-3p	CLIP-seq
MIRT773091	hsa-miR-4767	CLIP-seq
MIRT773092	hsa-miR-4786-5p	CLIP-seq
MIRT773093	hsa-miR-494	CLIP-seq
MIRT773094	hsa-miR-508-5p	CLIP-seq
MIRT773095	hsa-miR-510	CLIP-seq
MIRT773096	hsa-miR-514	CLIP-seq
MIRT773097	hsa-miR-514b-3p	CLIP-seq
MIRT773098	hsa-miR-520d-5p	CLIP-seq
MIRT773099	hsa-miR-524-5p	CLIP-seq
MIRT773100	hsa-miR-543	CLIP-seq
MIRT773101	hsa-miR-548q	CLIP-seq
MIRT773102	hsa-miR-612	CLIP-seq
MIRT773103	hsa-miR-642b	CLIP-seq
MIRT773104	hsa-miR-646	CLIP-seq
MIRT773105	hsa-miR-661	CLIP-seq
MIRT773106	hsa-miR-744	CLIP-seq
MIRT773107	hsa-miR-760	CLIP-seq
MIRT773108	hsa-miR-761	CLIP-seq
MIRT773109	hsa-miR-762	CLIP-seq
MIRT773110	hsa-miR-767-3p	CLIP-seq
MIRT773111	hsa-miR-769-5p	CLIP-seq
MIRT773112	hsa-miR-802	CLIP-seq
MIRT773113	hsa-miR-922	CLIP-seq
MIRT773114	hsa-miR-939	CLIP-seq
MIRT773115	hsa-miR-940	CLIP-seq
MIRT773082	hsa-miR-4695-5p	CLIP-seq
MIRT773012	hsa-miR-1827	CLIP-seq
MIRT1555903	hsa-miR-24	CLIP-seq
MIRT1555904	hsa-miR-3065-3p	CLIP-seq
MIRT773050	hsa-miR-4283	CLIP-seq
MIRT1555905	hsa-miR-4437	CLIP-seq
MIRT773004	hsa-miR-1197	CLIP-seq
MIRT773005	hsa-miR-1207-5p	CLIP-seq
MIRT773006	hsa-miR-1266	CLIP-seq
MIRT773007	hsa-miR-1273f	CLIP-seq
MIRT773008	hsa-miR-128	CLIP-seq
MIRT773009	hsa-miR-1280	CLIP-seq
MIRT773010	hsa-miR-1285	CLIP-seq
MIRT1928202	hsa-miR-1321	CLIP-seq
MIRT773011	hsa-miR-144	CLIP-seq
MIRT773012	hsa-miR-1827	CLIP-seq
MIRT773013	hsa-miR-188-3p	CLIP-seq
MIRT773014	hsa-miR-1912	CLIP-seq
MIRT1928203	hsa-miR-1913	CLIP-seq
MIRT1928204	hsa-miR-192	CLIP-seq
MIRT1928205	hsa-miR-215	CLIP-seq
MIRT773016	hsa-miR-224	CLIP-seq
MIRT773018	hsa-miR-27a	CLIP-seq
MIRT773019	hsa-miR-27b	CLIP-seq
MIRT773020	hsa-miR-28-3p	CLIP-seq
MIRT773022	hsa-miR-31	CLIP-seq
MIRT1928206	hsa-miR-3130-3p	CLIP-seq
MIRT1928207	hsa-miR-3130-5p	CLIP-seq
MIRT773025	hsa-miR-3150a-3p	CLIP-seq
MIRT1928208	hsa-miR-3151	CLIP-seq
MIRT773028	hsa-miR-3175	CLIP-seq
MIRT773031	hsa-miR-3183	CLIP-seq
MIRT773032	hsa-miR-3185	CLIP-seq
MIRT773033	hsa-miR-3187-5p	CLIP-seq
MIRT773035	hsa-miR-3202	CLIP-seq
MIRT1928209	hsa-miR-324-3p	CLIP-seq
MIRT773039	hsa-miR-3652	CLIP-seq
MIRT773040	hsa-miR-3664-3p	CLIP-seq
MIRT773041	hsa-miR-3670	CLIP-seq
MIRT1928210	hsa-miR-370	CLIP-seq
MIRT773043	hsa-miR-3918	CLIP-seq
MIRT773045	hsa-miR-3937	CLIP-seq
MIRT773048	hsa-miR-4268	CLIP-seq
MIRT773049	hsa-miR-4269	CLIP-seq
MIRT773050	hsa-miR-4283	CLIP-seq
MIRT773054	hsa-miR-4316	CLIP-seq
MIRT773056	hsa-miR-4430	CLIP-seq
MIRT773057	hsa-miR-4435	CLIP-seq
MIRT773058	hsa-miR-4436a	CLIP-seq
MIRT1928211	hsa-miR-4447	CLIP-seq
MIRT773059	hsa-miR-4448	CLIP-seq
MIRT773061	hsa-miR-4459	CLIP-seq
MIRT1928212	hsa-miR-4472	CLIP-seq
MIRT1928213	hsa-miR-4482	CLIP-seq
MIRT773064	hsa-miR-4489	CLIP-seq
MIRT773065	hsa-miR-4492	CLIP-seq
MIRT773066	hsa-miR-4498	CLIP-seq
MIRT773067	hsa-miR-4505	CLIP-seq
MIRT773069	hsa-miR-4514	CLIP-seq
MIRT773070	hsa-miR-4518	CLIP-seq
MIRT773071	hsa-miR-4530	CLIP-seq
MIRT773073	hsa-miR-4632	CLIP-seq
MIRT773074	hsa-miR-4640-5p	CLIP-seq
MIRT773075	hsa-miR-4643	CLIP-seq
MIRT1928214	hsa-miR-4651	CLIP-seq
MIRT773077	hsa-miR-4668-3p	CLIP-seq
MIRT773079	hsa-miR-4685-5p	CLIP-seq
MIRT773080	hsa-miR-4687-5p	CLIP-seq
MIRT773081	hsa-miR-4692	CLIP-seq
MIRT773082	hsa-miR-4695-5p	CLIP-seq
MIRT773084	hsa-miR-4722-5p	CLIP-seq
MIRT773085	hsa-miR-4723-3p	CLIP-seq
MIRT773086	hsa-miR-4726-5p	CLIP-seq
MIRT1928215	hsa-miR-4739	CLIP-seq
MIRT773087	hsa-miR-4742-5p	CLIP-seq
MIRT1928216	hsa-miR-4749-3p	CLIP-seq
MIRT773088	hsa-miR-4755-3p	CLIP-seq
MIRT1928217	hsa-miR-4756-5p	CLIP-seq
MIRT773090	hsa-miR-4763-3p	CLIP-seq
MIRT1928218	hsa-miR-4780	CLIP-seq
MIRT1928219	hsa-miR-4793-3p	CLIP-seq
MIRT1928220	hsa-miR-491-5p	CLIP-seq
MIRT773093	hsa-miR-494	CLIP-seq
MIRT773095	hsa-miR-510	CLIP-seq
MIRT1928221	hsa-miR-608	CLIP-seq
MIRT773102	hsa-miR-612	CLIP-seq
MIRT773103	hsa-miR-642b	CLIP-seq
MIRT773109	hsa-miR-762	CLIP-seq
MIRT773112	hsa-miR-802	CLIP-seq
MIRT773114	hsa-miR-939	CLIP-seq
MIRT773115	hsa-miR-940	CLIP-seq
MIRT773003	hsa-miR-105	CLIP-seq
MIRT773004	hsa-miR-1197	CLIP-seq
MIRT773005	hsa-miR-1207-5p	CLIP-seq
MIRT773008	hsa-miR-128	CLIP-seq
MIRT773009	hsa-miR-1280	CLIP-seq
MIRT773010	hsa-miR-1285	CLIP-seq
MIRT773011	hsa-miR-144	CLIP-seq
MIRT2168943	hsa-miR-1470	CLIP-seq
MIRT773012	hsa-miR-1827	CLIP-seq
MIRT773014	hsa-miR-1912	CLIP-seq
MIRT2168944	hsa-miR-2114	CLIP-seq
MIRT773015	hsa-miR-214	CLIP-seq
MIRT773016	hsa-miR-224	CLIP-seq
MIRT773018	hsa-miR-27a	CLIP-seq
MIRT773019	hsa-miR-27b	CLIP-seq
MIRT773020	hsa-miR-28-3p	CLIP-seq
MIRT773022	hsa-miR-31	CLIP-seq
MIRT2168945	hsa-miR-3127-3p	CLIP-seq
MIRT773024	hsa-miR-3143	CLIP-seq
MIRT773031	hsa-miR-3183	CLIP-seq
MIRT773032	hsa-miR-3185	CLIP-seq
MIRT773033	hsa-miR-3187-5p	CLIP-seq
MIRT773035	hsa-miR-3202	CLIP-seq
MIRT773038	hsa-miR-3619-5p	CLIP-seq
MIRT773039	hsa-miR-3652	CLIP-seq
MIRT2168946	hsa-miR-3667-3p	CLIP-seq
MIRT773043	hsa-miR-3918	CLIP-seq
MIRT773049	hsa-miR-4269	CLIP-seq
MIRT2168947	hsa-miR-4274	CLIP-seq
MIRT773050	hsa-miR-4283	CLIP-seq
MIRT773051	hsa-miR-4291	CLIP-seq
MIRT773056	hsa-miR-4430	CLIP-seq
MIRT773058	hsa-miR-4436a	CLIP-seq
MIRT773061	hsa-miR-4459	CLIP-seq
MIRT773062	hsa-miR-4476	CLIP-seq
MIRT773064	hsa-miR-4489	CLIP-seq
MIRT773065	hsa-miR-4492	CLIP-seq
MIRT773066	hsa-miR-4498	CLIP-seq
MIRT773067	hsa-miR-4505	CLIP-seq
MIRT773069	hsa-miR-4514	CLIP-seq
MIRT773071	hsa-miR-4530	CLIP-seq
MIRT773072	hsa-miR-4533	CLIP-seq
MIRT773073	hsa-miR-4632	CLIP-seq
MIRT773074	hsa-miR-4640-5p	CLIP-seq
MIRT773075	hsa-miR-4643	CLIP-seq
MIRT773076	hsa-miR-4660	CLIP-seq
MIRT2168948	hsa-miR-4667-3p	CLIP-seq
MIRT773077	hsa-miR-4668-3p	CLIP-seq
MIRT773079	hsa-miR-4685-5p	CLIP-seq
MIRT773081	hsa-miR-4692	CLIP-seq
MIRT773082	hsa-miR-4695-5p	CLIP-seq
MIRT773084	hsa-miR-4722-5p	CLIP-seq
MIRT773085	hsa-miR-4723-3p	CLIP-seq
MIRT773086	hsa-miR-4726-5p	CLIP-seq
MIRT773087	hsa-miR-4742-5p	CLIP-seq
MIRT773090	hsa-miR-4763-3p	CLIP-seq
MIRT773093	hsa-miR-494	CLIP-seq
MIRT773095	hsa-miR-510	CLIP-seq
MIRT773096	hsa-miR-514	CLIP-seq
MIRT773097	hsa-miR-514b-3p	CLIP-seq
MIRT773100	hsa-miR-543	CLIP-seq
MIRT773102	hsa-miR-612	CLIP-seq
MIRT773103	hsa-miR-642b	CLIP-seq
MIRT773104	hsa-miR-646	CLIP-seq
MIRT773108	hsa-miR-761	CLIP-seq
MIRT773109	hsa-miR-762	CLIP-seq
MIRT773112	hsa-miR-802	CLIP-seq
MIRT773113	hsa-miR-922	CLIP-seq
MIRT773115	hsa-miR-940	CLIP-seq
MIRT773007	hsa-miR-1273f	CLIP-seq
MIRT773009	hsa-miR-1280	CLIP-seq
MIRT773012	hsa-miR-1827	CLIP-seq
MIRT2384013	hsa-miR-1908	CLIP-seq
MIRT1928203	hsa-miR-1913	CLIP-seq
MIRT1928204	hsa-miR-192	CLIP-seq
MIRT2384014	hsa-miR-2115	CLIP-seq
MIRT1928205	hsa-miR-215	CLIP-seq
MIRT1928206	hsa-miR-3130-3p	CLIP-seq
MIRT773025	hsa-miR-3150a-3p	CLIP-seq
MIRT1928208	hsa-miR-3151	CLIP-seq
MIRT773028	hsa-miR-3175	CLIP-seq
MIRT1928209	hsa-miR-324-3p	CLIP-seq
MIRT773045	hsa-miR-3937	CLIP-seq
MIRT773054	hsa-miR-4316	CLIP-seq
MIRT773069	hsa-miR-4514	CLIP-seq
MIRT773073	hsa-miR-4632	CLIP-seq
MIRT773081	hsa-miR-4692	CLIP-seq
MIRT2384015	hsa-miR-4706	CLIP-seq
MIRT1928216	hsa-miR-4749-3p	CLIP-seq
MIRT2384016	hsa-miR-4749-5p	CLIP-seq
MIRT1928218	hsa-miR-4780	CLIP-seq
MIRT1928219	hsa-miR-4793-3p	CLIP-seq
MIRT1928220	hsa-miR-491-5p	CLIP-seq
MIRT773093	hsa-miR-494	CLIP-seq
MIRT2384017	hsa-miR-516a-3p	CLIP-seq
MIRT773103	hsa-miR-642b	CLIP-seq
MIRT2384018	hsa-miR-663	CLIP-seq
MIRT773112	hsa-miR-802	CLIP-seq
MIRT773114	hsa-miR-939	CLIP-seq
MIRT773009	hsa-miR-1280	CLIP-seq
MIRT773020	hsa-miR-28-3p	CLIP-seq
MIRT1928210	hsa-miR-370	CLIP-seq
MIRT773048	hsa-miR-4268	CLIP-seq
MIRT773059	hsa-miR-4448	CLIP-seq
MIRT773073	hsa-miR-4632	CLIP-seq
MIRT773093	hsa-miR-494	CLIP-seq
MIRT773103	hsa-miR-642b	CLIP-seq
MIRT773112	hsa-miR-802	CLIP-seq
MIRT2384013	hsa-miR-1908	CLIP-seq
MIRT2384014	hsa-miR-2115	CLIP-seq
MIRT773025	hsa-miR-3150a-3p	CLIP-seq
MIRT1928208	hsa-miR-3151	CLIP-seq
MIRT773028	hsa-miR-3175	CLIP-seq
MIRT1928211	hsa-miR-4447	CLIP-seq
MIRT1928212	hsa-miR-4472	CLIP-seq
MIRT2384015	hsa-miR-4706	CLIP-seq
MIRT2384016	hsa-miR-4749-5p	CLIP-seq
MIRT1928220	hsa-miR-491-5p	CLIP-seq
MIRT2384017	hsa-miR-516a-3p	CLIP-seq
MIRT2384018	hsa-miR-663	CLIP-seq
MIRT773114	hsa-miR-939	CLIP-seq
MIRT2384013	hsa-miR-1908	CLIP-seq
MIRT2384014	hsa-miR-2115	CLIP-seq
MIRT2384015	hsa-miR-4706	CLIP-seq
MIRT2384016	hsa-miR-4749-5p	CLIP-seq
MIRT2384017	hsa-miR-516a-3p	CLIP-seq
MIRT2384018	hsa-miR-663	CLIP-seq

Show/Hide all(40)

GO ID	Ontology	Definition	Evidence	Reference
GO:0001523	Process	Retinoid metabolic process	TAS
GO:0002162	Function	Dystroglycan binding	ISS
GO:0005200	Function	Structural constituent of cytoskeleton	TAS	9652404
GO:0005201	Function	Extracellular matrix structural constituent	RCA	20551380, 27068509, 27559042, 28675934
GO:0005509	Function	Calcium ion binding	ISS
GO:0005515	Function	Protein binding	IPI	9417121, 21078624
GO:0005576	Component	Extracellular region	TAS
GO:0005604	Component	Basement membrane	IDA	9405491
GO:0005796	Component	Golgi lumen	TAS
GO:0005886	Component	Plasma membrane	TAS
GO:0006024	Process	Glycosaminoglycan biosynthetic process	TAS
GO:0006027	Process	Glycosaminoglycan catabolic process	TAS
GO:0007010	Process	Cytoskeleton organization	IEA
GO:0007165	Process	Signal transduction	TAS	9652404
GO:0007213	Process	G protein-coupled acetylcholine receptor signaling pathway	TAS	9405491
GO:0007528	Process	Neuromuscular junction development	IBA	21873635
GO:0009887	Process	Animal organ morphogenesis	IBA	21873635
GO:0009888	Process	Tissue development	IBA	21873635
GO:0016021	Component	Integral component of membrane	IEA
GO:0030198	Process	Extracellular matrix organization	TAS
GO:0033691	Function	Sialic acid binding	ISS
GO:0035374	Function	Chondroitin sulfate binding	ISS
GO:0043113	Process	Receptor clustering	IBA	21873635
GO:0043113	Process	Receptor clustering	IDA	15340048
GO:0043113	Process	Receptor clustering	IMP	9151673
GO:0043202	Component	Lysosomal lumen	TAS
GO:0043236	Function	Laminin binding	TAS	9652404
GO:0043395	Function	Heparan sulfate proteoglycan binding	ISS
GO:0043547	Process	Positive regulation of GTPase activity	ISS
GO:0045162	Process	Clustering of voltage-gated sodium channels	TAS	9405491
GO:0045202	Component	Synapse	ISS
GO:0045887	Process	Positive regulation of synaptic growth at neuromuscular junction	ISS
GO:0045944	Process	Positive regulation of transcription by RNA polymerase II	ISS
GO:0050808	Process	Synapse organization	TAS	9652404
GO:0051491	Process	Positive regulation of filopodium assembly	ISS
GO:0062023	Component	Collagen-containing extracellular matrix	HDA	23658023, 27068509, 27559042, 28675934
GO:0062023	Component	Collagen-containing extracellular matrix	HDA	20551380
GO:0062023	Component	Collagen-containing extracellular matrix	IDA	17628813
GO:0062023	Component	Collagen-containing extracellular matrix	TAS	22261194
GO:0070062	Component	Extracellular exosome	HDA	19199708, 20458337, 23533145

MIM	HGNC	e!Ensembl
103320	329	ENSG00000188157

Protein

UniProt ID

Protein name

Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment (C90); Agrin C-terminal 22 kDa fragment (C22)]

Protein function

[Isoform 1]: Heparan sulfate basal lamina glycoprotein that plays a central role in the formation and the maintenance of the neuromuscular junction (NMJ) and directs key events in postsynaptic differentiation. Component of the AGRN-LRP4 receptor

PDB

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF03146	NtA	31 → 146	Agrin NtA domain	Domain
PF07648	Kazal_2	197 → 242	Kazal-type serine protease inhibitor domain	Domain
PF07648	Kazal_2	270 → 317	Kazal-type serine protease inhibitor domain	Domain
PF00050	Kazal_1	335 → 389	Kazal-type serine protease inhibitor domain	Domain
PF07648	Kazal_2	411 → 461	Kazal-type serine protease inhibitor domain	Domain
PF07648	Kazal_2	489 → 534	Kazal-type serine protease inhibitor domain	Domain
PF07648	Kazal_2	552 → 599	Kazal-type serine protease inhibitor domain	Domain
PF07648	Kazal_2	616 → 669	Kazal-type serine protease inhibitor domain	Domain
PF07648	Kazal_2	704 → 750	Kazal-type serine protease inhibitor domain	Domain
PF00053	Laminin_EGF	793 → 844	Laminin EGF domain	Domain
PF00053	Laminin_EGF	847 → 901	Laminin EGF domain	Domain
PF07648	Kazal_2	923 → 969	Kazal-type serine protease inhibitor domain	Domain
PF01390	SEA	1132 → 1237	SEA domain	Family
PF00008	EGF	1333 → 1365	EGF-like domain	Domain
PF00054	Laminin_G_1	1400 → 1531	Laminin G domain	Domain
PF00008	EGF	1553 → 1584	EGF-like domain	Domain
PF00054	Laminin_G_1	1668 → 1803	Laminin G domain	Domain
PF00054	Laminin_G_1	1920 → 2051	Laminin G domain	Domain

Sequence

MAGRSHPGPLRPLLPLLVVAACVLPGAGGTCPERALERREEEANVVLTGTVEEILNVDPV
QHTYSCKVRVWRYLKGKDLVARESLLDGGNKVVISGFGDPLICDNQVSTGDTRIFFVNPA
PPYLWPAHKNELMLNSSLMRITLRNLEEVEFCVEDKPGTHFTPVPPTPPDACRGMLCGFG
AVCEPNAEGPGRASCVCKKSPCPSVVAPVCGSDASTYSNECELQRAQCSQQRRIRLLSRG
PCGSRDPCSNVTCSFGSTCARSADGLTASCLCPATCRGAPEGTVCGSDGADYPGECQLLR
RACARQENVFKKFDGPCDPCQGALPDPSRSCRVNPRTRRPEMLLRPESCPARQAPVCGDD
GVTYENDCVMGRSGAARGLLLQKVRSGQCQGRDQCPEPCRFNAVCLSRRGRPRCSCDRVT
CDGAYRPVCAQDGRTYDSDCWRQQAECRQQRAIPSKHQGPCDQAPSPCLGVQCAFGATCA
VKNGQAACECLQACSSLYDPVCGSDGVTYGSACELEATACTLGREIQVARKGPCDRCGQC
RFGALCEAETGRCVCPSECVALAQPVCGSDGHTYPSECMLHVHACTHQISLHVASAGPCE
TCGDAVCAFGAVCSAGQCVCPRCEHPPPGPVCGSDGVTYGSACELREAACLQQTQIEEAR
AGPCEQAECGSGGSGSGEDGDCEQELCRQRGGIWDEDSEDGPCVCDFSCQSVPGSPVCGS
DGVTYSTECELKKARCESQRGLYVAAQGACRGPTFAPLPPVAPLHCAQTPYGCCQDNITA
ARGVGLAGCPSACQCNPHGSYGGTCDPATGQCSCRPGVGGLRCDRCEPGFWNFRGIVTDG
RSGCTPCSCDPQGAVRDDCEQMTGLCSCKPGVAGPKCGQCPDGRALGPAGCEADASAPAT
CAEMRCEFGARCVEESGSAHCVCPMLTCPEANATKVCGSDGVTYGNECQLKTIACRQGLQ
ISIQSLGPCQEAVAPSTHPTSASVTVTTPGLLLSQALPAPPGALPLAPSSTAHSQTTPPP
SSRPRTTASVPRTTVWPVLTVPPTAPSPAPSLVASAFGESGSTDGSSDEELSGDQEASGG
GSGGLEPLEGSSVATPGPPVERASCYNSALGCCSDGKTPSLDAEGSNCPATKVFQGVLEL
EGVEGQELFYTPEMADPKSELFGETARSIESTLDDLFRNSDVKKDFRSVRLRDLGPGKSV
RAIVDVHFDPTTAFRAPDVARALLRQIQVSRRRSLGVRRPLQEHVRFMDFDWFPAFITGA
TSGAIAAGATARATTASRLPSSAVTPRAPHPSHTSQPVAKTTAAPTTRRPPTTAPSRVPG
RRPPAPQQPPKPCDSQPCFHGGTCQDWALGGGFTCSCPAGRGGAVCEKVLGAPVPAFEGR
SFLAFPTLRAYHTLRLALEFRALEPQGLLLYNGNARGKDFLALALLDGRVQLRFDTGSGP
AVLTSAVPVEPGQWHRLELSRHWRRGTLSVDGETPVLGESPSGTDGLNLDTDLFVGGVPE
DQAAVALERTFVGAGLRGCIRLLDVNNQRLELGIGPGAATRGSGVGECGDHPCLPNPCHG
GAPCQNLEAGRFHCQCPPGRVGPTCADEKSPCQPNPCHGAAPCRVLPEGGAQCECPLGRE
GTFCQTASGQDGSGPFLADFNGFSHLELRGLHTFARDLGEKMALEVVFLARGPSGLLLYN
GQKTDGKGDFVSLALRDRRLEFRYDLGKGAAVIRSREPVTLGAWTRVSLERNGRKGALRV
GDGPRVLGESPKSRKVPHTVLNLKEPLYVGGAPDFSKLARAAAVSSGFDGAIQLVSLGGR
QLLTPEHVLRQVDVTSFAGHPCTRASGHPCLNGASCVPREAAYVCLCPGGFSGPHCEKGL
VEKSAGDVDTLAFDGRTFVEYLNAVTESELANEIPVPETLDSGALHSEKALQSNHFELSL
RTEATQGLVLWSGKATERADYVALAIVDGHLQLSYNLGSQPVVLRSTVPVNTNRWLRVVA
HREQREGSLQVGNEAPVTGSSPLGATQLDTDGALWLGGLPELPVGPALPKAYGTGFVGCL
RDVVVGRHPLHLLEDAVTKPELRPCPTP

Sequence length

2068

Interactions

View interactions

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